Here is a list of simple one line awk, grep and sed commands that are very useful when dealing with big large datasets. This is particularly true for any work involving genomics, sequencing, etc. I have used them numerous time with datafile generated by Plink, for genome assembly, protein and gene databases. 
Showing posts with label grep. Show all posts
Showing posts with label grep. Show all posts
Tuesday, December 3, 2013
How to Manipulate Big Data with One-liner Commands
Here is a list of simple one line awk, grep and sed commands that are very useful when dealing with big large datasets. This is particularly true for any work involving genomics, sequencing, etc. I have used them numerous time with datafile generated by Plink, for genome assembly, protein and gene databases.
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